CDS

Accession Number TCMCG065C27489
gbkey CDS
Protein Id XP_004978840.1
Location complement(join(4746436..4746546,4746741..4746833,4747043..4747138,4747305..4747453,4747537..4747690,4747777..4747872,4747960..4748049,4748535..4748693,4748802..4749023,4749241..4749357,4749450..4749521,4749603..4749770,4750418..4750486,4750601..4750705,4750907..4751221,4751619..4752629))
Gene LOC101778212
GeneID 101778212
Organism Setaria italica

Protein

Length 1008aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004978783.3
Definition DExH-box ATP-dependent RNA helicase DExH10 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category A
Description rRNA-processing arch domain
KEGG_TC -
KEGG_Module M00393        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12598        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010093        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048444        [VIEW IN EMBL-EBI]
GO:0048449        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0055087        [VIEW IN EMBL-EBI]
GO:0060147        [VIEW IN EMBL-EBI]
GO:0060149        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0060969        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0090701        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGGAAGAGGCAGAGAACATCAGCAAGCGCAAGGCGCCGGACTCGAGCGGGGTGGAGGATCCGAGCCCGCCGGCGCCGGCGTCGACGGCGCAATCGCAGGCGGAGGCGGACCCGGCGGCCAAGCGCCGGAACACCTCCCGGTCGTGCATCCACGAGGTCGCTGTCCCGAAGAGCTACGAGGCGGCCAAGGACGAGGCGGTGCACGGGACGCTGGCGAACCCGGAGTTCAACGGGGAGATGGCCAAGCAGTACCCGTTCAAGCTAGACCCCTTCCAGAGCGTCTCCATCGCGTGCCTGGAGAGGAACGAGTCGGTGCTCGTCTCCGCGCACACCTCCGCGGGGAAGACCGTCGTCGCCGAGTACGCCATCGCCATGGCGTTCCGGGACAAGCAGAGGGTCATCTACACCTCCCCGCTCAAGGCCCTGAGCAACCAGAAGTACAGGGAGCTCAGCCAGGAGTTCACAGATGTCGGGCTGATGACAGGCGATGTCACGCTCCAGCCAAATGCCACGTGCCTGGTCATGACTACCGAGATCCTCAGGGCCATGCTCTACAGGGGCTCTGAGGTGATCAAGGAGGTTGCTTGGGTTATATTCGATGAGATTCATTACATGAAGGATCGCGAGAGAGGAGTCGTGTGGGAGGAGAGTATAATTTTCCTGCCCCCTGCCATCAAGATGGTCTTTCTGTCCGCTACCATGTCGAACGCGACCGAGTTTGCGGAGTGGATATGCAGTCTGCACAAGCAGCCCTGTCACGTTGTGTATACGGACTTCAGGCCGACACCGTTGCAGCACTATGTGTTTCCAATTGGTGGTTCTGGTCTCTACCTTGTAGTAGATGAAAGCGGGCAGTTCAGAGAGGATAACTTTGGGAAGCTACAGGACTCATTTAGTAAGCAAAATAATCAATTAGATGGAAGGAGAGGTGGTGGACCTAAAGCGAGTGGTCGAATTGCAAAAGGTGGAAGCGCCTCTGGGAATTCTGACATATACAGAATTGTCAAGATGATCATGGAGCGGAAGTTTCAACCAGTCATAATTTTCAGCTTTAGTAGAAGAGAATGTGAGCACCATGCCATGTCTATGTCAAAACTTGACTTCAACACTGAAGATGAAAAGGAATGCATCGAGCAAGTTTTCCATAATGCTATTGGTTGTTTAGTCGAAGAAGATAGAAGTTTACCTGCTATAGAGTTGATGTTGCCGCTTCTTAAACGAGGCATTGCAGTACACCATTCTGGACTACTTCCCATAATCAAAGAGCTGGTGGAATTGCTCTTTCAAGAAGGCCTTGTGAAAGCTCTCTTTGCTACTGAGACATTTGCCATGGGTCTTAATATGCCTGCAAAAACGGTTGTTTTCACATCTGTCAAAAAATGGGATGGTGATACTAACCGCTATATTGGTTCTGGAGAATATATACAGATGAGTGGAAGAGCTGGCCGGCGTGGCAAGGATGAACGTGGCATTTGTGTTATAATGATAGATGAGAAGATGGAAATGAGTGTTATCAAGGACATGGTGTTAGGCAAACCGGCACCTCTTGTCAGTACTTTCCGGCTGAGCTATTACAGTATTCTGAACTTGATGAGCCGTGTGGAGGGCCAATTTACCGCAGAACATGTGATTAGGCATTCATTCCATCAGTTTCAGTATGAGAAGGCATTGCCAGAAATAGTTCAAAAGATCACTCGGTTGGAGGATGAAGCAACCTTGCTTGACTCCTCAGGAGAGATTGATCTTGCTGAATATCACAAATTGGGCCTTGATATATCTGAACTTGAGAAGAAAATAATGTCTGAGATGATTAGACCAGAGAGGGCTTTGTTATATTTGGTTCCTGGAAGGCTGGTTAAAGTGAGGGATGGTTCAACCGACTGGGGATGGGGTGTGGTTGTAAATGTAGTGAAGAAACCTCCAGCATCTGGGACTCTTCCCCCTGCATTAAGTGCATCACGCAGCAATAGCTATATAGTGGATACCTTGCTTCACTGCTCTTCTAGTTCCAATGAGAATGGATCACGTTCAAAGCCATGCCCGCCTCGCCCAGGGGAGAAGGGTGAAATGCATGTGGTACCTGTACCATTGCCTTTAATATCTGGTCTAAGCAGTGTTAGAATCAACATTCCTCCGGATCTGCGACCACCTGAAGCAAGGCAAAATATACTTTTTGCAGTGCAAGAACTAGGAAAGCGCTACCCCCAAGGCCTTCCGAAGCTACATCCAATAAATGACATGGGTATTCAAGAACCTGAGCTAGTAGACTTGGTTCATAAACTTGAGGAACTTGAACAGAAACAATGTTCTCACCGACTTCATAAGTCTGGTCAAAGTGAGCAGGAACTATCATGGTACCAAAGAAAAGCAGATTTGAATAGTGAAATTCAGCAATTGAAGTCAAAGATGCGGGATTCACAGCTACAAAAATTCAGAGATGAACTTAGGAACCGGTCACGCGTTCTGAAGATGCTTGGTCATATTGATGCTGATGGCGTTCTCCAGCTAAAGGGACGTGCTGCCTGTTTAATAGACACAGGGGATGAGCTGCTTATCACTGAACTTATGTTCAATGGTACATTTAATGATCTCGATCATCATCAAGTTGCTTCCCTTGCTAGCTGCTTTGTACCTTGCGATAAATCAAGTGAGCAAATACGCCTAAGAAATGAACTTTCTGGGCCGATGATGCAACTTCAGGAGGCTGCGAGAAAAATAGCTGAGGTACAACGAGAATGCAAATTAGAAGTAAATGTGGAGGAATATGTTGAATCAACCTGCAGACCCTACCTGATGGATGTCATATACTGCTGGTCGAGGGGAGCCACCTTTGCAGAGGTGATGGAAATGACCGACATTTTTGAAGGAAGTGTCATAAGGCTTGCCAGAAGGCTGGATGAATTTCTGAATCAGTTGAGAGCCGCGGCTGAAGCCGTTGGGGAGGTTAACCTTGAGGAGAAGTTTAAGAAGGCGAGCGAGAGCTTGCGTCGGGGCATCATGTTTTCCAACTCATTGTATCTGTAA
Protein:  
MGEEAENISKRKAPDSSGVEDPSPPAPASTAQSQAEADPAAKRRNTSRSCIHEVAVPKSYEAAKDEAVHGTLANPEFNGEMAKQYPFKLDPFQSVSIACLERNESVLVSAHTSAGKTVVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLQPNATCLVMTTEILRAMLYRGSEVIKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICSLHKQPCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDESGQFREDNFGKLQDSFSKQNNQLDGRRGGGPKASGRIAKGGSASGNSDIYRIVKMIMERKFQPVIIFSFSRRECEHHAMSMSKLDFNTEDEKECIEQVFHNAIGCLVEEDRSLPAIELMLPLLKRGIAVHHSGLLPIIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDTNRYIGSGEYIQMSGRAGRRGKDERGICVIMIDEKMEMSVIKDMVLGKPAPLVSTFRLSYYSILNLMSRVEGQFTAEHVIRHSFHQFQYEKALPEIVQKITRLEDEATLLDSSGEIDLAEYHKLGLDISELEKKIMSEMIRPERALLYLVPGRLVKVRDGSTDWGWGVVVNVVKKPPASGTLPPALSASRSNSYIVDTLLHCSSSSNENGSRSKPCPPRPGEKGEMHVVPVPLPLISGLSSVRINIPPDLRPPEARQNILFAVQELGKRYPQGLPKLHPINDMGIQEPELVDLVHKLEELEQKQCSHRLHKSGQSEQELSWYQRKADLNSEIQQLKSKMRDSQLQKFRDELRNRSRVLKMLGHIDADGVLQLKGRAACLIDTGDELLITELMFNGTFNDLDHHQVASLASCFVPCDKSSEQIRLRNELSGPMMQLQEAARKIAEVQRECKLEVNVEEYVESTCRPYLMDVIYCWSRGATFAEVMEMTDIFEGSVIRLARRLDEFLNQLRAAAEAVGEVNLEEKFKKASESLRRGIMFSNSLYL